installed the docking package, and for some reason the checkbox "Show Component Tree" was unchecked in the Object Inspector...
It may be that this setting is part of the "Desktop" => as in the desktop layouts you can have for Edit vs Debug, in the desktop drop down button.
When docked windows have obviously other coordinates than when no docking is used. So Docking has it's own set of desktops, and when you toggle docking on/off (or install it for the first time), then you switch between those different sets of desktops.
In the past, when docking created it's own desktops (on first run), it left lots of values unset.
I just tested that, if I start an IDE the very first time (with empty config folder) and use docking, then this panel is hidden.
Please report that as a bug on the tracker, so it wont get forgotten.